| Sponsor: | National Science Foundation (NSF) |
| Grant Number: | ACI-9721348 |
| Period | 1998 - 2003 |
| Amount | $134,608 |
| PI: | Kay A. Robbins Email Web |
| The objectives of this project are to develop practical tools for online analysis and visualization of experimental video data that should be applicable in both research and teaching laboratories. The system will have a familiar web-based interface, promote collaborative visualization and remote access and take advantage of distributed computing resources to attain near-realtime performance. The system will be particularly oriented towards the seamless acquisition of video data in order to detect transitions during the running of experiments. Fast display techniques and spatial Karhunen-Loeve reconstructions will be among the techniques implemented to allow experimentalists to map out bifurcation structure as experimental parameters are changed. |
| Combustion and pattern formation Web |
| Distributed neural processing Web |
| Davis data viewing system Web |
| Data acquisition in Antarctica Web |
| Smarts project Web |
| Waves Web |
| Kevin Allen (undergraduate) |
| Robert Baltimore (graduate) |
| Fernando Cano (undergraduate) |
| Laura Connor (graduate) |
| Daniel Espinoza (undergraduate) |
| Todd Fichtemaier (graduate) |
| Igor Grinshpan (graduate) |
| Andrew Hudson (undergraduate) |
| Raymond Hunley (graduate) |
| Jason Johnson (undergraduate) |
| Lea Leite (undergraduate) |
| Mark Robinson (graduate) |
| Brent Shumaker (graduate) |
| Jeremy Stevens (undergraduate) |
| Keyin Tu (graduate) |
| Zheng Zhi (graduate) |
| Donald D. Blankenship, SOAR, UT Austin
Web |
| Bijoy Ghosh, Washington University St. Louis
Web |
| Michael Gorman, University of Houston
Web |
| David Senseman, Department of Biology UTSA
Web |
| Philip Ulinski, University of Chicago Web |
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Synchronized views for exploring populations of neurons K. A. Robbins, I. Grinshpan, K. Allen and D. M. Senseman (2004) Data Visualization and Analysis '2004, accepted. |
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Using derivatives to compare cortical waves across preparations K. A. Robbins and D. M. Senseman (2003) Neurocomputing, 52-54:885-891. |
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High-speed VSD imaging of visually evoked cortical waves:
Decomposition into intra- and intercortical wave motions D. M. Senseman and K. A. Robbins J. Neurophysiology (2002) 87(3):1499-1514. |
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Visualizing splitting and
merging processes Kay A. Robbins, Clinton Jeffery and Steven Robbins Journal of Visual Languages and Computing (2000) vol. 11 no. 6:593-614. |
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Fast Visualization Methods for Comparing Dynamics: A Case Study in Combustion Kay A. Robbins and Michael Gorman IEEE Visualization '2000 (2000) 433-436. |
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Using Process-Level Packet Routing to Support Real-time
Data Visualization: A Case Study in Antarctica Laura Connor and Kay Robbins Communications in Computing'2000 (2000) 47-53. |
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Modal behavior of cortical neural networks during visual processing. D. M. Senseman and K. A. Robbins J. Neuroscience, (1999) vol. 19 RC3:1-7. |
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Visualization of scientific video data using KL decomposition Kay A. Robbins IEEE Trans. Visualization and Computer Graphics (1998) vol. 4 no. 4, 330-343. |
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Visualizing
differences in movies of cortical activity Kay A. Robbins and David M. Senseman IEEE Visualization '98, (1998) 217-224. |
| Linear Data Decomposition Methods for Forced
Non-Linear Spatio-temporal Systems: PCA Versus ICA Brent Shumaker Master's Thesis, University of Texas at San Antonio, August, 2001 Web |
| Real-time Airborne Dataq Visualization under QNX: Performance Evaluation of a Geophysical Application in Antartica Laura Connor Master's Thesis, University of Texas at San Antonio, June 1999 Web |
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Computer Techniques and Algorithms for the Detection of Heteroclinic
Connections in Experimental Data Mark Grechanik Master's Thesis, University of Texas at San Antonio, June 1998 |
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Exploring behavior of neuronal populations with Davis K. A. Robbins I. Grinshpan, K. Allen and D. M. Senseman Soc. For Neuroscience Abstracts 2003. |
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Dynamical systems analysis
of propagating waves in turtle visual cortex P. Ulinski, B. Ghosh, K. A. Robbins and D. M. Senseman 2003 SIAM Conf. on Applications of Dynamical Systems (DS03), Snowbird, UT. |
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Extraction of wave structure from biological data K. A. Robbins and D. M. Senseman 2003 SIAM Conf. on Applications of Dynamical Systems (DS03), Snowbird, UT. |
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Exploring behavior of neuronal populations with Davis K. A. Robbins I. Grinshpan, K. Allen and D. M. Senseman 2003 RCMI Spring Symp., Abstract 1021, San Antonio, TX. |
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Dynamic analysis of propagating waves
generated by the cholinergic theta oscillator in rat neocortex: KL decomposition of high-speed VSD movies A. R. Kohl, K. A. Robbins and D. M. Senseman Soc. for Neuroscience Abstracts, (2002) 28:651.5. |
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Dynamics of propagating cortical waves in vitro and in silico L. Flores, K. A. Robbins and D. M. Senseman GUM'2002, San Antonio TX. |
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Visualizing neuronal models for exploration I. Grinshpan and K. A. Robbins GUM'2002, San Antonio TX, 2002. |
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Comparison of cerebellar activation by afferent and direct electrical stimulation
using high-speed VSD imaging M. Ariel, H. Lu, K. A. Robbins, J. M. Bower and D. M. Senseman Soc. for Neuroscience Abstracts, (2002) 28:360.2. |
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Using derivatives to compare cortical
waves
across preparations K. A. Robbins and D. M. Senseman Computational Neuroscience (CNS'2002), Chicago, IL. |
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Modal analysis of excitatory waves in the visual cortex K. A. Robbins and D. M. Senseman First SIAM Conference on the Life Sciences, (2002) Boston, MA. |
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Localization and characterization of entorhinal
theta band oscillators by KL Decomposition of VSD movie D. M. Senseman and K. A. Robbins Soc. for Neuroscience Abstracts, (2001) 27:537.8. |
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Modal structure of the cortical response to moving and non-moving stimuli
in the intact turtle brain D. M. Senseman and K. A. Robbins Soc. for Neuroscience Abstracts, (2000) 26:446. |
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Anisotropic spread of depolarization between visual cortical areas provides a physical basis for the modal structure of coherent activity D. M. Senseman and K. A. Robbins Soc. for Neuroscience Abstracts, (1999) 25:1421. |
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Visual interpretation of transitions in spatiotemporal systems K. A. Robbins and D. M. Senseman Fifth SIAM Conf. on Applications of Dynamical Systems, (1999) Snowbird, UT. |
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Characterization of three intrinsic modes of visually-driven cortical activation D. M. Senseman and K. A. Robbins Soc. for Neuroscience Abstracts, (1998) 24:530. |